Hot Topics in the Bay of Fundy
Compiled for the Fundy Forum - July 2001

A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z

Air Deposition
The impacts of air deposition on coastal and marine waters are just beginning to be understood. Air pollutants of concern include sulphur dioxide (SO2), nitrogen dioxide (NO2), carbon monoxide (CO), and polycyclic aromatic hydrocarbons (PAHs). Although industrial sources of these pollutants have been reduced through federal regulation, sources such as automobile exhaust and long-range transportation from other areas continue to contribute significant levels to the Bay of Fundy region. In addition to human health (respiratory) problems, these pollutants contribute to acidification and nutrient enrichment of coastal waters. The use of local coal, which contains high levels of natural mercury, in thermal generating stations may represent a significant source of atmospheric mercury emissions in the region. Air pollution is currently monitored by the Hunstman Marine Science Centre in New Brunswick as part of Environment Canada's Environmental Monitoring and Assessment Network (EMAN). The Quoddy EMAN Site is the only marine coastal site on the East Coast and one of five in the Atlantic.

Agriculture
Agricultural activity impacts the marine environment in many different ways. Agricultural run-off containing animal waste, fertilizers, pesticides, and other chemicals can lead to marine contamination and an excess input of nutrients to coastal waters. Pathogens contained in animal wastes may also make their way to the coastal waters and may result in shellfish flat and swimming beach closures. Dyking, infilling, and the construction of tidal barriers used to facilitate the development of agricultural land have eliminated more than 80% of the saltmarshes around the Bay of Fundy. (see Eutrophication).

Aquaculture
Aquaculture is a relatively recent industry in the Bay of Fundy (first site established in 1979) and is dominated by Atlantic salmon net-cage sites. Although the industry is continually improving as technology and experience improve, problems still occur. Some of the current issues associated with salmon aquaculture include overstocking, overuse of certain sites, crowding in certain locations, pests and disease such as infectious salmon anemia and sea lice, waste fallout leading to anoxia, nutrient loading, and escapees. For example, aquaculture escapees now far outnumber wild Atlantic salmon in the Magaguadavic River fish ladder counts. Lobster fishermen are also concerned about the use of chemical theraputants to which lobsters may be susceptible. Despite these concerns, aquaculture is a very lucrative business, pulling in over $2 billion dollars for New Brunswick last year. (see Rare and Threatened Species - Fish)

Archaeology
With the gradual rise in sea level, archaeological sites that were on the coast 5000 to 3500 years ago have probably long since been washed away. Only a very few finds of this age have been made (primarily along rivers) but no intact site has yet been properly excavated. Large shell middens (garbage dumps) in coastal areas with good clam flats suggest that shellfish were an important food for the Mi'kmaq 2000 years ago. Important archaeological sites from the historic Mi'kmaq period include drawings carved into bedrock known as petroglyphs. Other historic sites include early European settlements and forts. Archaeological sites along the coastline are severely threatened by coastal erosion. Unfortunately, there are very few resources to salvage the sites before they wash away, and none for preventing the erosion.

Ballast Water Dumping
At present, there are no mandatory regulations for the discharge of ballast water in the Bay of Fundy. However, national guidelines developed by Transport Canada and the International Maritime Organization have been in effect since September 2000. Generally, ships are asked to exchange ballast in open ocean (greater than 2000 meters) if possible. Unfortunately, many ships do not have such an opportunity because of safety concerns, such as storms at sea, or because they never go into waters that depth (e.g., US traffic coming up from the eastern seaboard into Saint John or Bayside). As a result, ships sometimes release ballast water as they enter the Bay of Fundy. Currently, ships are not required to report or record where they discharge their ballast. Following the example of other Canadian ports, the Port of Saint John is considering development of its own guidelines for ballast water exchange. Ballast water dumping is a concern because of the potential for the introduction and establishment of non-native and invasive species (see Introduced Species).

Barriers to Rivers
Tidal barriers (dykes, causeways, dams and wharves) now obstruct 25 of the 44 major rivers around the Bay of Fundy, and there are indications that this has altered sediment transport and other natural processes in many areas. For example, it is suspected that barriers have contributed to changes in the composition of intertidal muds, which have resulted in declines in Corophium abundance. Construction of a causeway across the Avon River at Windsor, Nova Scotia has resulted in the expansion of thick brown mud below it, with pronounced shallowing of the estuary further downstream. The spinning turbines of a power plant located on a causeway across the Annapolis River kill or seriously injure large numbers of migrating fish each year. The extent of fish mortality as a result of the spinning turbines is extremely difficult to determine; however it is suspected to play a significant role in a declining presence of old fish in the Annapolis River. In addition to the problem of building barriers across rivers, some fishermen have expressed concern about the potential effects of reopening causeways or removing dams. In particular, there is concern about the impact of increased sedimentation on the lobster fishery, as sediments previously trapped behind barriers are released down river and into the Bay. (see Rare and Threatened Species - Invertebrates)

Biodiversity
According to the UN Convention on Biological Diversity, biodiversity is "the variability among all living organisms from all sources, including, inter alia, terrestrial, marine and other aquatic ecosystems and ecological complexes of which they are part; this includes diversity within species, between species and of ecosystems." In essence, biodiversity is a general term to describe the diversity of habitats, species, and genetic material that is found in any given area. The primary threat to biodiversity is considered to be habitat loss. The second greatest threat is now considered by many to be the introduction of non-indigenous species into sensitive ecosystems. (see Introduced Species and Habitat Degradation and Loss)

Bioinvasions (see Introduced Species)

Birds (see Migratory Birds)

Coastal Development
The extent and significance of impacts on shorelines and shallow coastal waters from cumulative coastal developments is poorly understood. Activities causing impacts include housing development, campsite and trailer park development, wharf construction, and groin construction. If carried out improperly, development may result in habitat destruction, pollution, and disturbance of organisms. (see Habitat Degradation and Loss section)

Climate and Atmospheric Change
The Intergovernmental Panel on Climate Change states "the balance of evidence suggests a discernible human influence on global climate." This anthropogenic (human induced) effect is especially important in Atlantic Canada, where ecosystems such as the Bay of Fundy exist in a delicate balance that is highly sensitive to changes in the climate system. Climate change may result in changes to the frequency and intensity of winter storms, droughts, floods, and alterations in sea surface temperature, as well as increased vulnerability of communities and habitats to accelerated sea level rise. Changes in atmospheric ozone may increase the amount of UV-B radiation reaching land and sea, which may impact diatom species and assemblages that overlay the mudflats in the basins of the Upper Bay. (see Storm Surges and Coastal Flooding)

Contamination
Oil refineries, pulp mills, port activities, manufacturing plants, forestry operations, agriculture, and other industrial activities together release complex mixtures of heavy metals, chlorinated hydrocarbons, petroleum products and other chemicals into nearby coastal waters. (see Land-Based Sources of Marine Pollution).

Mercury
Mercury is a known neurotoxin and can cause developmental and reproductive problems in exposed organisms. Studies have shown that breeding loons in the Bay of Fundy area have among the highest body burden of mercury in North America. Levels of mercury in striped bass in the St. John River are five times higher than what is considered acceptable for human consumption. High levels of mercury have also been reported in tissues of porpoises, seals, fish, and lobsters. One possible source may be the natural mercury content of local coal, which is released into the atmosphere upon incineration. Long-range atmospheric transportation of mercury to the Maritimes is another major source. The average annual mercury deposited in Atlantic Canada from all atmospheric sources is 8.5g per square kilometre.

Organochlorines
Organochlorines are chlorinated organic compounds (such as PCB, DDT, dieldrin, etc.) that have been used extensively in the past for a variety of industrial purposes. Dieldrin was used as an agricultural insecticide and along with chlordane was used in the timber manufacturing industry. PCP was used in the timber treatment industry as an antisapstain. DDT was an insecticide used widely in horticulture and agriculture. PCBs were used in the electrical supply industry, principally in transformers and capacitors. Dioxins are produced as by products of a number of industrial, manufacturing and combustion processes. Many of these substances do not break down readily in the environment and are known to bioaccumulate through the food chain. As a result, even though these chemicals are not used in Canada anymore, they continue to persist. As local sources decrease, long-range atmospheric transportation of organochlorines may increase in importance as a source of contamination for the Bay of Fundy. According to recent studies, harbour porpoises in Passamaquoddy Bay and around Grand Mannan carry five times more DDT and three times more PCBs than beluga whales in the St. Lawrence River. DDT and PCBs are known to cause reproductive problems in animals, as well as kidney, liver, and stomach damage.

Polycyclic Aromatic Hydrocarbons (PAHs)
Polycyclic aromatic hydrocarbons (PAHs) are a group of over 100 different chemicals that are formed during the incomplete burning of coal, oil and gas, garbage, or other organic substances. Some PAHs are produced naturally (volcanoes, forest fires, etc.); however, most are produced through human activities, such as burning coal and driving cars. A few PAHs are used in medicines or to make dyes, plastics, and pesticides. Some PAHs are carcinogenic and have been identified as a priority concern by groups such as ACAP Saint John and the Global Program of Action in the Gulf of Maine. Non-carcinogenic effects in animals may include reproductive problems, birth defects, and immune deficiencies. PAHs do not dissolve readily in water, and tend to accumulate in sediments or in plant and animal tissue. Thay can also be broken down by microorganisms over a period of weeks or months.

Tributyl Tin (TBT)
Tributyl tin is a chemical found in anti-fouling paint that coats the bottom of ships to prevent the growth of organisms like barnacles and algae. TBT is being dubbed the most toxic chemical that man has deliberately introduced in to an aquatic environment. Everytime a ship comes into a harbour it leaves a wake of contamination as it slowly releases TBT molecules into the water. It is found from coast to coast in marine and freshwater systems where there are ships. The first indicator of its toxicity was discovered in dogwhelks where TBT caused serious deformities harming their immune and reproductive systems. Sites tested along Canada's coast showed contamination anywhere from 56% to 100% in some places like Halifax and Sydney. Further studies have shown how the toxin affects mussels, starfish, flatfish and whales. It easily moves up the food chain and studies are underway to determine its impact on human immune and reproductive systems. TBT is toxic in the tiniest amount. Efforts are underway around the world to have the chemical banned by 2008 but even if this happens the problem will still exist where the toxic molecules have settled and could take up to 20 to 30 years before they are gone.

Dredging
Dredging is a concern both in terms of habitat destruction, sediment and species disruption, and contamination. Dredged material from marine waters contains a large amount of salt and may contain contaminants. If this material is disposed of on land, there is concern that groundwater may become contamination near the disposal site. Material that is dumped in coastal waters can increase suspended solids in the water column and smother benthic organisms. If the sediments are contaminated, there is the potential for acute or chronic toxicity to marine organisms and risks to human health. Saint John Harbour is dredged annually to maintain water depth for port operation. The dredged material from this site is disposed of at the Black Point Disposal Site, located approximately six miles southeast of the harbour.

Ecotourism
Ecotourism activities are becoming increasingly abundant. Major activities include whale watching, kayaking, hiking, sailing, and beach recreation. While most of these activities are considered to be environmentally benign and generally sustainable, their increasing popularity may create stress on natural resources and ecosystem function. For example, the number of tour boat operators in the Bay increased from 4 in 1994 to 27 in 1997. Most of these operate between Grand Manan and Brier Island, at the mouth of the Bay, where the endangered Right Whale population spends much of its time. However, in 1997 a voluntary Code of Ethics was developed by marine tour operators to help reduce impacts on whale populations. Conflicts between seal culling and ecotourism have also arisen. (see Seals and Rare and Threatened Species - Marine Mammals)

Erosion
The Bay of Fundy is apparently getting deeper as portions of the bottom are eroded by strong tidal currents. It is possible that bottom trawling may be breaking through the thin and fragile gravel sea-floor surface and facilitating erosion of underlying muds. However, it is also possible that deepening could be the result of natural processes, as the bay is relatively young geologically speaking at only 9,000 years or so.

Bay of Fundy coastlines are also under threat from erosion. Waterfront property, archaeological sites, coastal infrastructure, and coastal habitat are just some of the features that may be damaged by wind, waves, and rain.

Eutrophication
Eutrophication is the increase in nutrient levels of a particular environment above what is normally expected. Eutrophication typically occurs when human activities, such as forestry, agriculture, sewage treatment and urban run-off, contribute new sources of nutrients into the environment. Excess nutrients may stimulate the growth of algae and other plants and organisms, which in turn depletes the level of dissolved oxygen in the water and makes it difficult for other organisms to "breath." Excess nutrients may also stimulate the growth of harmful algal blooms in marine waters. Nutrients from sewage and fertilizer effluents are considered to be the primary cause of eutrophication in marine waters. Another major source of nutrients to marine waters is the air deposition of nitrogen. (see Air Deposition and Harmful Algal Blooms)

Fisheries - Closures

Clam flats
Clam flat closures are a common occurrence in the Bay of Fundy due to concerns of paralytic shellfish poisoning and sewage pollution. Mussel harvesting is permanently closed.

Atlantic Salmon
On September 15, 1993, all rivers flowing into the Bay of Fundy were closed to recreational and native Atlantic salmon fisheries. The commercial Atlantic salmon fishery has been closed since the early 1970's. (see Rare and Endangered Species - Fish)

Fisheries - Conflicts
Conflicts have arisen in the past between fixed gear fishers and mobile gear fishers. More recently, concern has been expressed regarding the effects of bottom dragging for scallops, sea urchins, and groundfish on non-target species and benthic habitat. In particular, there is concern about the spread of dragging activity into areas that were previously unaffected, resulting in the degradation of these unintentional protected areas. Bottom dragging occurs regularly over a large portion of the Bay of Fundy.

Fisheries - New
With the collapse of many traditional fisheries, new harvestable species are being investigated. New fisheries, such as rockweed, sea urchin, sea cucumber, periwinkle, bloodworm, and krill fisheries, are emerging tentatively and with varying levels of regulation. Relatively little is known about these species, their associated harvesting methods, and the impacts that harvest may have on the ecosystem. There is concern that increased pressure on lower trophic level species (prey species) may make recovery of the finfish species that rely on them more difficult. There is also concern that reductions in these species may disrupt the Bay of Fundy food web. Rockweed beds serve as habitat for as many as 22 commercial species of fish and their food sources and act as a major source of nutrients to coastal waters. There is concern that the ecological function of rockweed, and other "underutilized" species, may be compromised by commercial harvest.

Fisheries -- Established
Marine fisheries have a long history in the Bay of Fundy and are an important part of the social, economic, and cultural seascape. Many traditional fisheries have declined over the past few decades; however, several new fisheries have emerged. In particular, finfish and high trophic level fisheries (fish high up in the food web) have tended to decline, while lower trophic level fisheries (organisms lower in the food web, like krill and shrimp) are being expanded. There is some concern that fishing at lower trophic levels may seriously disrupt the marine food web and cause difficulties for organisms that rely on low trophic level species for food. The major established fisheries in the Bay of Fundy include lobster, scallops, clams, herring, cod, pollock, haddock, and flatfish. (see Fisheries - New)

Lobster
Lobster landings have increased dramatically over the past two years and are well above average levels. However, a 1995 review of the Atlantic lobster fishery by the Fisheries Research Conservation Council concluded that the current fishery might be unsustainable. In response, fishermen have been directed to develop new management measures to attempt to achieve a doubling of egg production.

Scallops
Catch rates for scallops have increased moderately since 1997, but are still well below the median level for 1980 to present.

Clams
There has been a drop in landings for soft-shelled clams primarily due to faecal coliform related beach closures. Harvesting of clams has also been impacted by the occurrence of phytotoxins (such as paralytic shellfish poison).

Groundfish
Some concern has been expressed about a shift in groundfish fishing effort from the western portion of NAFO Div. 4X into the Bay of Fundy. This movement of fishing activity from the Scotia shelf towards the Bay of Fundy has led to a steady increase in cod, haddock and pollock landings in the Bay over the past ten years, with landings more than tripling for pollock.

Forestry
Forestry activities such as road building, harvesting, clearing, log transport, pesticide spraying, and fertilization can have a significant impact or coastal and marine waters. These activities can lead to increased sedimentation in rivers and streams, which then travels to the coast and adds to the sediment load of marine waters. Pesticides and other chemicals applied during forest management also end up in coastal waters, resulting in contamination. Fertilizers contribute to nutrient enrichment and potential eutrophication of the marine environment. (see Eutrophication)

Fossil Sites
The fossil cliffs at Joggins are internationally renowned for the quality and uniqueness of their vertebrate and other fossils. Although the cliffs are legally protected by the Special Places Protection Act, there are concerns that the zone of protection is not adequate and that it is not effectively publicized or monitored. There is a group currently working to bring the Joggins Fossil Cliffs site to the point where an application can be made for UNESCO World Heritage status, but it may take up to 5 years to complete the application. Other unique sites around the Bay of Fundy include the Parrsboro Fossil Site, Horton Bluff, and Diligent River. Both fossil and archaeological sites are non-renewable sources of valuable information, so coastal erosion is a major concern. (see Archaeology and Erosion)

Habitat Degradation and Loss

Estuaries
As the place where river meets ocean, an estuary is a body of water that acts as an interface between fresh and salt water. Estuaries are brackish in nature and have unique characteristics (salinity and temp) that make them both difficult for organisms to live in (low resident biodiversity) but also an attractive place to feed, hide, and rear young. There are some organisms that have specifically adapted to these conditions, but most organisms in estuaries have fresh or salt-water origins. Many marine species, particularly birds and fish, use estuaries at some time during their life cycle to breed. By providing high nutrient levels and relative shelter from wind and waves, estuaries serve as an ideal environment for the growth of young. Estuaries also perform the valuable ecological functions of filtering pollutants and nutrients from groundwater and protecting the coast from rough seas. In the absence of a clear management regime by federal and provincial agencies, estuaries have not received the attention they deserve relative to their ecological importance. Consequently, estuaries are threatened by coastal development, contamination, and other human impacts. (see Coastal Development and Contamination)

Salt Marshes
Dyking, infilling, and construction of barriers to tidal flow have eliminated more than 80% of the saltmarshes that were present in 1604. Most of these original marshes were converted to agricultural land that is still in use today. Only 15% of original salt marshes remain in the Bay of Fundy, Musquash Marsh being one of them. Upstream marshes along the Petitcodiac River near Moncton have been affected by waste dumping, construction of a causeway, and highway development. Champlain Place Mall and other developments in Dieppe sit on infilled marshland. (see Marine Protected Areas)

Harmful Algal Blooms
A red tide caused by the organism Mesodinium rubrum was observed in Passamaquoddy Bay from early August to mid-September, 1998. Although M. rubrum does not produce a toxin, mortalities of aquatic organisms may occur through secondary effects such as asphyxiation as a result of oxygen depletion. For example, low levels of fish mortalities have been observed when red tides drift through salmon aquaculture sites. There have also been occasional problems with blooms of toxic dinoflagellates and other noxious microorganisms; however, it is uncertain whether these are increasing as a result of human activity or whether they are just being recorded more effectively. These outbreaks often result in closures of shellfish beds, reduced marketability of cultured shellfish, toxic effects on cultured finfish, and periodic human illness. (see Fisheries - Closures)

Introduced Species
Non-native species may be introduced to the Bay of Fundy through ballast water exchange, accidental release, or even intentional release. Many introduced organisms are unable to survive in their new environment, but some species thrive without natural predation. These invasive species may out-compete existing species, leading to declines in biodiversity, disruptions in marine food webs and ecosystem dynamics, and other negative ecological impacts. Human activities may also be impacted, such as through the clogging of pipes that has occurred in the Great Lakes as a result of a population explosion of introduced zebra mussels. (see Ballast Water Exchange)

The European green crab (Carcinus maenas), a voracious predator of clams, oysters, mussels, marine worms, and juvenile crustaceans, has been spreading in the Bay of Fundy during the last few decades. In California, green crab introduction has resulted in the loss of up to 50% of Manila clam stocks. The green crab has also been blamed for the collapse of the soft-shell clam industry in Maine.

The European periwinkle (Littorina littorea) the dominant snail along the coast, is actually a non-indigenous species. It arrived with early settlers to North America, as did many other species. L.littorea has since out competed at least one native snail (Ilyanassa obsoleta) in some places, but since there is no data on marine ecosystems from before the arrival of L. littorea, it's difficult to tell what other effects it has had.

The Japanese shore crab (Hemigrapsus sanguineus), while not yet in the Bay of Fundy, has been making its way up the coast since it was first reported in southern New Jersey in 1988. It is a highly mobile organism in both its adult and larval stages. The Japanese shore crab is similar to the green crab, both in appearance and that they are both voracious predators of young shellfish. What effect they will have on the Bay of Fundy ecosystem is still unclear at this point.

Land-Based Sources of Marine Pollution
According to Canada's National Programme of Action for the Protection of the Marine Environment from Land-Based Activities, 80% of marine pollution originates from land-based sources. Many of these are identifiable point sources, such as industrial effluent and sewage outfalls; however, non-point sources such as agriculture, forestry, and urban run-off are much harder to pinpoint and are equally harmful. Land-based pollution, in the form of nutrient loading, pesticides, and other organic and inorganic contaminants, has resulted in problems with shellfish habitat contamination and beach closures. In addition to surface run-off, atmospheric deposition of contaminants from land-based emission sources is also an issue of concern. (see Air Deposition, Agriculture, Forestry)

Lighthouses
Lighthouses are an important part of the heritage of the Bay of Fundy, representing a traditional way of life that is being lost through advances in technology and de-staffing. In the past, lighthouses were run and taken care of by lighthouse keepers. However, most of these keepers have now been replaced by automated systems. As a result, many lighthouses have reached a state of disrepair and will be downgraded or disposed of in the next few years. The Canadian Coast Guard has the responsibility for these changes. Fortunately, some lighthouses properties (including the lighthouses at Cape Enrage, Cape d'Or, Spencers Island, Five Islands, Walton, and Cape Forchu) are being purchased and maintained as historic sites by NGO's. The Nova Scotia Lighthouse Preservation Society and a group in New Brunswick are the primary NGOs dealing with Lighthouses around the Bay of Fundy.

Marine Debris
Typical ocean litter consists primarily of plastics and styrofoam, as well as cardboard and paper, glass bottles, metal cans, chemical and paint containers, condoms, tampon applicators, syringes, etc. Ocean litter spoils the natural beauty of the coast and creates health and safety issues for local residents and visitors. It also causes problems for fishermen and boaters who get debris trapped in their nets or engines. Floating plastic is a direct threat (through ingestion, asphyxiation, and entanglement) to marine life, including birds, fish, and whales. Large industrial and commercial debris, such as abandoned equipment, vehicles, netting, and fish traps or weirs, creates substantial difficulties for those attempting to clean and restore coastal habitats.

Marine Protected Areas (MPAs)
Marine Protected Areas are generally defined as "Any area of intertidal or subtidal terrain, together with its overlying water and associated flora, fauna, historical and cultural features, which has been reserved by law or other effective means to protect part or all of the enclosed environment." The creation of Marine Protected Areas may serve a variety of purposes, from the protection of marine species and habitats for research and conservation to the recognition of culturally significant sites. Several potential MPA sites have been identified in the Bay of Fundy region, including Musquash estuary and an offshore site for the protection of the Northern Right Whale population.

Marine Transportation
Shipping in the Bay of Fundy includes international tanker and container traffic, coastal shipping, ferries, and cruise vessels. Much of this shipping is concentrated at the mouth of the Bay, with Saint John, New Brunswick being the major focal point. The overall impact of marine transportation is unknown; however, key concerns include vessel collisions with marine mammals, accidental oil spills and ongoing oil spillage from onloading/offloading of oil cargo, bilge dumping, ballast water exchange, noise, and other vessel emissions or sources of contamination. (see Ballast Water Exchange, Contamination, and Oil Spills)

Migratory Birds
The Bay of Fundy is renowned for the large numbers of migratory birds that use its bays, estuaries, and saltmarshes as stopovers during their journey. The large roosts seen at high-tide are composed of species, including plovers, turnstones, sandpipers, yellowlegs, snipes, godwits, curlews and phalaropes. The Bay of Fundy plays host to 75-95% of the world's population of Semipalmated Sandpipers. Semipalmated Sandpipers feed on mud shrimp (Corophium volutator) out on the tidal flats, doubling their weight in just a few weeks to prepare for their long trip to South America. Scientists are concerned that changes in mudflat composition have resulted in a drastic reduction in the abundance of these vital mud shrimp. It is suspected that the damming of tidal rivers may have played a role in the changes in mud composition. (see Barriers to Rivers and Rare and Threatened Species-Birds)

Issues that have been identified by the Canadian Wildlife Service, who has responsibility for migratory bird conservation, include control of sea duck predation at mussel farming operations, localized changes in gull distribution around fin fish operations, absence of zooplankton in the upper water layers and resulting loss of staging area for migrating phalaropes, reductions in the major food source (Corophium volutator) for migrating semipalmated sandpipers, and the effects of acid rain on water bird populations.

Mining
There has been no significant sea floor mining activity in the Bay of Fundy to date. However, this may change at any time. Some exploratory titanium mining has been conducted in Minas Basin. There is also growing commercial interest in several large fields of submarine sand dunes or waves, heaped up by the powerful tidal currents. One such area in Scots Bay, southwest of Cape Split, may contain up to 35 million cubic meters of coarse sand and fine-grained gravel. Land-based mining operations also continue to exert influence on coastal waters, at times directing effluents into Bay of Fundy waters.

Oil and Gas Development
Although two exploratory oil wells were drilled in the 1980's, no oil or gas extraction has been undertaken in the Bay of Fundy to date. However, the potential for exploration and extraction remains.

Oil Spills
Although there have been no major oil spills in the Bay of Fundy, there are frequent small spills from a variety of sources that threaten harbours, aquaculture sites and seabird colonies in the region. Observations after some of these small spills indicate that the flora and fauna of the rocky shores of the outer Bay, where wave action is very intense, would probably recover quickly from a major spill. However, the impacts of any spilled oil that penetrates into the inner Bay and fouls salt marshes and mudflats are likely to be much more serious and longer lasting.

Pulp and Paper Mills
Five pulp and paper mills discharge effluent and wood waste into major estuaries of the Bay of Fundy. In 1991, Lake Utopia pulp mill situated in the L'Etang Estuary was prosecuted for violations of provincial and federal environmental requirements. In 1998, the Irving Pulp and Paper mill at Reversing Falls was fined $50,000 for releasing effluent into the St. John River and for not reporting the spill in a timely manner. Last January, however, Irving unveiled a $300 million system complete with newly developed reverse osmosis technology to improve their production process. Other mills on the Bay of Fundy include Irving Paper in Saint John, Minas Basin P&P, and CKF at Hantsport. These are monitored for regulatory purposes.

Radioactivity
The Point Lepreau Nuclear Generating System (opened in 1982) discharges radioactivity (primarily tritium) into the marine environment as well as into the atmosphere. This radioactivity remains closely monitored through the Point Lepreau Environmental Monitoring Program. Studies show that tritium levels in the immediate vicinity of the site are slightly elevated; however, counts in other locations remain close to background levels. In the past, operational problems that have resulted in temporary shutdown of the reactor have heightened public concern about the potential for accidental releases.

Rare and Threatened Species

Marine Mammals
The Right Whale (Eubalaena glacialis) was declared endangered in 1990 as a result of critically low population numbers. Historically, Right Whales were almost hunted to extinction through commercial whaling, and ever since they have had a hard time recovering. Ongoing threats for Right Whales include the noise and disturbance caused by human activities, pollution from oil and other toxic substances, and degradation of inshore habitat. Since Right Whales are surface feeders, they are also particularly threatened by collisions with ships. Over half of the remaining 300 Right Whales inhabit the Bay of Fundy in the summer months. With such a limited number left, the survival of each Right Whale is extremely important, and each birth is also quite significant. On a positive note, there were at least 30 recorded Right Whale births this year, a dramatic increase from the previous several years. (see Ecotourism)

The Western Atlantic Harbour Porpoise (Phocoena phocoena) was declared threatened in 1991. A large number of harbour porpoises are caught and killed by fishing gear and nets each year; however, a warming of the waters south-east of New Brunswick could be the cause of the decrease in harbour porpoises in this area. In addition, the Bay of Fundy and Gulf of Maine are quite polluted by organochlorines, and this could be causing reproductive problems for harbour porpoises. The harbour porpoise has been protected under the Canada Fisheries Act since 1982. (see Contamination)

The Fin Whale (Balaenoptera physalus) was designated a species of special concern in 1987. Populations were historically reduced through whaling; however, since a moratorium on Fin Whale exploitation was established by the International Whaling Commission, populations have shown signs of recovery. Today, depletion of capelin (an important prey species for Fin Whales) stocks and chemical pollutants may be negatively impacting these whales.

The Western North Atlantic Humpback Whale (Megaptera novaeangliae) was designated a species of special concern in 1985. Overexploitation of Humpback Whales greatly reduced their numbers prior to 1960, and ongoing exploitation of their prey continues to negatively impact this species. Depletion of capelin is of particular concern. Since large trawlers became a part of commercial fishing operations in the 1970s, Humpbacks have been caught occasionally in fishing nets. The Humpback Whale populations in the North Atlantic have been protected by the International Whaling Commission since 1955.

Reptiles
Leatherback turtles (Dermochelys coriacea) was declared endangered in 1981. Although leatherback turtles nest in tropical and subtropical areas, they do travel widely the rest of the year and are often found in temperate waters. Entanglement in fishing gear is considered a major threat to this species. While not all entangled leatherbacks drown, there is an appreciable amount of adult, subadult and likely juvenile mortality associated with incidental capture of sea turtles. In New Brunswick, leatherback turtles have been protected under the provincial Endangered Species Act since 1996.

Fish
Atlantic salmon populations in most of the rivers draining into the Bay of Fundy are in extremely fragile states and, as a result, the Bay of Fundy Atlantic salmon has recently been added to the endangered species list. The Department of Fisheries and Oceans can find salmon in only 19 of 33 rivers of the inner Bay of Fundy. Returning adults are providing a small fraction of the required egg depositions and wild juvenile numbers are low. The cause of their decline is not certain, although there is evidence that they are 'disappearing' while at sea. The Atlantic Salmon Federation is currently conducting studies to determine why the species is not recovering as initially hoped.

Birds
The Piping Plover was declared endangered in 1985. The 1996 International Piping Plover Census counted 5,913 adult Piping Plovers in the world. From this total, 422 adults (7 % of the world's population) used the beaches of Atlantic Canada in the summer to raise their young. This number is down from the 1991 census count of 509 adults. Human disturbance of nesting Piping Plover is one of the main causes for their decline.

Vast flocks of Red-Necked Phalaropes, such as were seen regularly in late summer/early fall in Head Harbour Passage (Passamaquoddy region) in 1970s, have not been seen there since the mid-1980s. Their disappearance from Head Harbour Passage may reflect the disappearance of their copepod prey (pelagic invertebrates) from the surface layers of the sea in this location. Changes in copepod distribution may have resulted from natural causes and Red-Necked Phalaropes are still found in deeper waters.

Invertebrates
On some mudflats, numbers of the burrowing amphipod, Corophium volutator, have plummeted from about 30,000 per square metre 15 years ago, to almost none today. These amphipods are an important prey species for many migratory birds, including Semi-Palmated Sandpipers. There is some concern that changes in amphipod distribution may effect the feeding behaviour of these endangered birds. (see Sediment Changes and Sedimentation)

Sea Level Rise (see Storm Surges and Coastal Flooding)

Seals
Conflicts have arisen between seals and fishers, as seals open lobster trap doors or destroy traps to get at bait. They swim freely in and out of herring weirs, tearing holes in twine and driving herring away. Seals have also been accused of stealing bait from longlines and damaging aquaculture nets. Permits to kill problem seals have been issued to full-time fishermen by DFO, but these have not been issued to fish farmers. Culling of seals has created some conflict with the tourism industry. (see Ecotourism)

Sediment Changes and Sedimentation
Significant changes in the sediment character of intertidal zones are being reflected in changing behaviour or success of migratory birds such as the semipalmated sandpiper. Changes in mud composition may be impacting organisms that live in the mud, such as Corophium volutator, which in turn may be impacting their main predators, the shore birds. This transformation of mud composition may be related to changes in water flow due to the construction of river and tidal barriers or it may be related to a gradual rise in sea level. (see Sea Level Rise, Tidal Barriers)

Sedimentation resulting from aquaculture cage fallout (undigested food, waste, etc.) may be a significant problem in some Fundy estuaries. Land-based activities, such as agriculture, forestry, and coastal development, act as major sources of sediment to rivers and coastal waters, which in turn increases the cloudiness of the water column, makes photosynthesis difficult for marine plants, and smothers benthic organisms. Excess sediments may also be deposited on ecologically sensitive sites or other areas that create an inconvenience to humans. However, excess sediment may also be deposited in previously sediment-deprived locations, which may allow for the creation of new habitat.

Sewage Disposal
Untreated and improperly collected wastewater is a threat to human health via contamination of beaches, drinking water, and shellfish harvesting areas. A major hotspot of sewage contamination is Saint John Harbour, which treats only 50% of its domestic wastewater; however, Saint John has initiated an ongoing harbour clean-up project to assist in dealing with this problem. The Bear River sewage treatment plant, on the other hand, has turned its self-sustaining facility into a tourist attraction.

Species Composition
There appears to be a change in fish species composition away from the dominant cod, halibut and haddock of recent decades towards a greater number of sharks and rays. Whether this change is permanent or temporary, and the implications of such a change, are still unclear.

Storm Surges and Coastal Flooding
A storm surge is a essentially big pile of water that gets pushed up ahead of a storm by high winds much like water pushed up the bow of an ocean-going vessel. Large positive storm surges at times of significant high tides can cause coastal flooding. Such events are usually associated with large offshore waves and high surf in the coastal zone. Surges with accompanying high-energy storm waves can lead to significant coastal erosion and damage to coastal infrastructure and habitat. On 5 October 1869, a storm with hurricane force winds travelled up the Bay of Fundy causing a 2 metre tidal surge resulting in extensive flooding. The lowlands at the head of the Bay of Fundy and other low lying areas continue to be quite susceptible to flooding by storm surges.

It is likely that the sea-level rise associated with ocean warming and thermal expansion (see Climate Change) will heighten the frequency and intensity of storm surges, increasing flooding risks over time. This will have significant impact on populations living in coastal regions, as coastal storm surges become an increasing threat to life and property.

Surveillance and Enforcement
Historically, surveillance, monitoring, and enforcement have been carried out on a sectoral basis (e.g., fisheries, shipping). However, as ocean uses have developed, intensified and spread over larger areas, conflicts between users have increased. As a result, the need for more effective and integrated approach to compliance and enforcement has become apparent.

Submarine Cables
The greatest threat to submarine cables, which carry more than 75 percent of overseas voice, fax, data and internet traffic, comes from fishing activity. On average a fishing vessel damages a submarine cable somewhere in the world more than once a week. The laying of submarine cables, in turn, may also damage sensitive benthic habitat. There is currently one active submarine cable running from Nova Scotia to New Brunswick through the Bay of Fundy. There may be other inactive cables resting on the sea floor.

Tidal Power Development
Many proposals to take advantage of the Bay of Fundy's unique tidal activity have been put forward in the past. Aside from a small pilot tidal power generating station in Annapolis Basin (opened in 1985), these proposals have all been shelved; however, there is growing concern that this issue will re-emerge in the near future.

Whales (see Rare and Threatened Species - marine mammals)

 

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